| // Ceres Solver - A fast non-linear least squares minimizer | 
 | // Copyright 2013 Google Inc. All rights reserved. | 
 | // http://code.google.com/p/ceres-solver/ | 
 | // | 
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 | // modification, are permitted provided that the following conditions are met: | 
 | // | 
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 | //   used to endorse or promote products derived from this software without | 
 | //   specific prior written permission. | 
 | // | 
 | // THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" | 
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 | // SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS | 
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 | // ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE | 
 | // POSSIBILITY OF SUCH DAMAGE. | 
 | // | 
 | // Author: sameeragarwal@google.com (Sameer Agarwal) | 
 |  | 
 | #include "ceres/covariance.h" | 
 |  | 
 | #include <algorithm> | 
 | #include <cmath> | 
 | #include "ceres/compressed_row_sparse_matrix.h" | 
 | #include "ceres/cost_function.h" | 
 | #include "ceres/covariance_impl.h" | 
 | #include "ceres/local_parameterization.h" | 
 | #include "ceres/map_util.h" | 
 | #include "ceres/problem_impl.h" | 
 | #include "gtest/gtest.h" | 
 |  | 
 | namespace ceres { | 
 | namespace internal { | 
 |  | 
 | TEST(CovarianceImpl, ComputeCovarianceSparsity) { | 
 |   double parameters[10]; | 
 |  | 
 |   double* block1 = parameters; | 
 |   double* block2 = block1 + 1; | 
 |   double* block3 = block2 + 2; | 
 |   double* block4 = block3 + 3; | 
 |  | 
 |   ProblemImpl problem; | 
 |  | 
 |   // Add in random order | 
 |   problem.AddParameterBlock(block1, 1); | 
 |   problem.AddParameterBlock(block4, 4); | 
 |   problem.AddParameterBlock(block3, 3); | 
 |   problem.AddParameterBlock(block2, 2); | 
 |  | 
 |   // Sparsity pattern | 
 |   // | 
 |   //  x 0 0 0 0 0 x x x x | 
 |   //  0 x x x x x 0 0 0 0 | 
 |   //  0 x x x x x 0 0 0 0 | 
 |   //  0 0 0 x x x 0 0 0 0 | 
 |   //  0 0 0 x x x 0 0 0 0 | 
 |   //  0 0 0 x x x 0 0 0 0 | 
 |   //  0 0 0 0 0 0 x x x x | 
 |   //  0 0 0 0 0 0 x x x x | 
 |   //  0 0 0 0 0 0 x x x x | 
 |   //  0 0 0 0 0 0 x x x x | 
 |  | 
 |   int expected_rows[] = {0, 5, 10, 15, 18, 21, 24, 28, 32, 36, 40}; | 
 |   int expected_cols[] = {0, 6, 7, 8, 9, | 
 |                          1, 2, 3, 4, 5, | 
 |                          1, 2, 3, 4, 5, | 
 |                          3, 4, 5, | 
 |                          3, 4, 5, | 
 |                          3, 4, 5, | 
 |                          6, 7, 8, 9, | 
 |                          6, 7, 8, 9, | 
 |                          6, 7, 8, 9, | 
 |                          6, 7, 8, 9}; | 
 |  | 
 |  | 
 |   vector<pair<const double*, const double*> > covariance_blocks; | 
 |   covariance_blocks.push_back(make_pair(block1, block1)); | 
 |   covariance_blocks.push_back(make_pair(block4, block4)); | 
 |   covariance_blocks.push_back(make_pair(block2, block2)); | 
 |   covariance_blocks.push_back(make_pair(block3, block3)); | 
 |   covariance_blocks.push_back(make_pair(block2, block3)); | 
 |   covariance_blocks.push_back(make_pair(block4, block1));  // reversed | 
 |  | 
 |   Covariance::Options options; | 
 |   CovarianceImpl covariance_impl(options); | 
 |   EXPECT_TRUE(covariance_impl | 
 |               .ComputeCovarianceSparsity(covariance_blocks, &problem)); | 
 |  | 
 |   const CompressedRowSparseMatrix* crsm = covariance_impl.covariance_matrix(); | 
 |  | 
 |   EXPECT_EQ(crsm->num_rows(), 10); | 
 |   EXPECT_EQ(crsm->num_cols(), 10); | 
 |   EXPECT_EQ(crsm->num_nonzeros(), 40); | 
 |  | 
 |   const int* rows = crsm->rows(); | 
 |   for (int r = 0; r < crsm->num_rows() + 1; ++r) { | 
 |     EXPECT_EQ(rows[r], expected_rows[r]) | 
 |         << r << " " | 
 |         << rows[r] << " " | 
 |         << expected_rows[r]; | 
 |   } | 
 |  | 
 |   const int* cols = crsm->cols(); | 
 |   for (int c = 0; c < crsm->num_nonzeros(); ++c) { | 
 |     EXPECT_EQ(cols[c], expected_cols[c]) | 
 |         << c << " " | 
 |         << cols[c] << " " | 
 |         << expected_cols[c]; | 
 |   } | 
 | } | 
 |  | 
 |  | 
 | class UnaryCostFunction: public CostFunction { | 
 |  public: | 
 |   UnaryCostFunction(const int num_residuals, | 
 |                     const int32 parameter_block_size, | 
 |                     const double* jacobian) | 
 |       : jacobian_(jacobian, jacobian + num_residuals * parameter_block_size) { | 
 |     set_num_residuals(num_residuals); | 
 |     mutable_parameter_block_sizes()->push_back(parameter_block_size); | 
 |   } | 
 |  | 
 |   virtual bool Evaluate(double const* const* parameters, | 
 |                         double* residuals, | 
 |                         double** jacobians) const { | 
 |     for (int i = 0; i < num_residuals(); ++i) { | 
 |       residuals[i] = 1; | 
 |     } | 
 |  | 
 |     if (jacobians == NULL) { | 
 |       return true; | 
 |     } | 
 |  | 
 |     if (jacobians[0] != NULL) { | 
 |       copy(jacobian_.begin(), jacobian_.end(), jacobians[0]); | 
 |     } | 
 |  | 
 |     return true; | 
 |   } | 
 |  | 
 |  private: | 
 |   vector<double> jacobian_; | 
 | }; | 
 |  | 
 |  | 
 | class BinaryCostFunction: public CostFunction { | 
 |  public: | 
 |   BinaryCostFunction(const int num_residuals, | 
 |                      const int32 parameter_block1_size, | 
 |                      const int32 parameter_block2_size, | 
 |                      const double* jacobian1, | 
 |                      const double* jacobian2) | 
 |       : jacobian1_(jacobian1, | 
 |                    jacobian1 + num_residuals * parameter_block1_size), | 
 |         jacobian2_(jacobian2, | 
 |                    jacobian2 + num_residuals * parameter_block2_size) { | 
 |     set_num_residuals(num_residuals); | 
 |     mutable_parameter_block_sizes()->push_back(parameter_block1_size); | 
 |     mutable_parameter_block_sizes()->push_back(parameter_block2_size); | 
 |   } | 
 |  | 
 |   virtual bool Evaluate(double const* const* parameters, | 
 |                         double* residuals, | 
 |                         double** jacobians) const { | 
 |     for (int i = 0; i < num_residuals(); ++i) { | 
 |       residuals[i] = 2; | 
 |     } | 
 |  | 
 |     if (jacobians == NULL) { | 
 |       return true; | 
 |     } | 
 |  | 
 |     if (jacobians[0] != NULL) { | 
 |       copy(jacobian1_.begin(), jacobian1_.end(), jacobians[0]); | 
 |     } | 
 |  | 
 |     if (jacobians[1] != NULL) { | 
 |       copy(jacobian2_.begin(), jacobian2_.end(), jacobians[1]); | 
 |     } | 
 |  | 
 |     return true; | 
 |   } | 
 |  | 
 |  private: | 
 |   vector<double> jacobian1_; | 
 |   vector<double> jacobian2_; | 
 | }; | 
 |  | 
 | // x_plus_delta = delta * x; | 
 | class PolynomialParameterization : public LocalParameterization { | 
 |  public: | 
 |   virtual ~PolynomialParameterization() {} | 
 |  | 
 |   virtual bool Plus(const double* x, | 
 |                     const double* delta, | 
 |                     double* x_plus_delta) const { | 
 |     x_plus_delta[0] = delta[0] * x[0]; | 
 |     x_plus_delta[1] = delta[0] * x[1]; | 
 |     return true; | 
 |   } | 
 |  | 
 |   virtual bool ComputeJacobian(const double* x, double* jacobian) const { | 
 |     jacobian[0] = x[0]; | 
 |     jacobian[1] = x[1]; | 
 |     return true; | 
 |   } | 
 |  | 
 |   virtual int GlobalSize() const { return 2; } | 
 |   virtual int LocalSize() const { return 1; } | 
 | }; | 
 |  | 
 | class CovarianceTest : public ::testing::Test { | 
 |  protected: | 
 |   virtual void SetUp() { | 
 |     double* x = parameters_; | 
 |     double* y = x + 2; | 
 |     double* z = y + 3; | 
 |  | 
 |     x[0] = 1; | 
 |     x[1] = 1; | 
 |     y[0] = 2; | 
 |     y[1] = 2; | 
 |     y[2] = 2; | 
 |     z[0] = 3; | 
 |  | 
 |     { | 
 |       double jacobian[] = { 1.0, 0.0, 0.0, 1.0}; | 
 |       problem_.AddResidualBlock(new UnaryCostFunction(2, 2, jacobian), NULL, x); | 
 |     } | 
 |  | 
 |     { | 
 |       double jacobian[] = { 2.0, 0.0, 0.0, 0.0, 2.0, 0.0, 0.0, 0.0, 2.0 }; | 
 |       problem_.AddResidualBlock(new UnaryCostFunction(3, 3, jacobian), NULL, y); | 
 |     } | 
 |  | 
 |     { | 
 |       double jacobian = 5.0; | 
 |       problem_.AddResidualBlock(new UnaryCostFunction(1, 1, &jacobian), NULL, z); | 
 |     } | 
 |  | 
 |     { | 
 |       double jacobian1[] = { 1.0, 2.0, 3.0 }; | 
 |       double jacobian2[] = { -5.0, -6.0 }; | 
 |       problem_.AddResidualBlock( | 
 |           new BinaryCostFunction(1, 3, 2, jacobian1, jacobian2), | 
 |           NULL, | 
 |           y, | 
 |           x); | 
 |     } | 
 |  | 
 |     { | 
 |       double jacobian1[] = {2.0 }; | 
 |       double jacobian2[] = { 3.0, -2.0 }; | 
 |       problem_.AddResidualBlock( | 
 |           new BinaryCostFunction(1, 1, 2, jacobian1, jacobian2), | 
 |           NULL, | 
 |           z, | 
 |           x); | 
 |     } | 
 |  | 
 |     all_covariance_blocks_.push_back(make_pair(x, x)); | 
 |     all_covariance_blocks_.push_back(make_pair(y, y)); | 
 |     all_covariance_blocks_.push_back(make_pair(z, z)); | 
 |     all_covariance_blocks_.push_back(make_pair(x, y)); | 
 |     all_covariance_blocks_.push_back(make_pair(x, z)); | 
 |     all_covariance_blocks_.push_back(make_pair(y, z)); | 
 |  | 
 |     column_bounds_[x] = make_pair(0, 2); | 
 |     column_bounds_[y] = make_pair(2, 5); | 
 |     column_bounds_[z] = make_pair(5, 6); | 
 |   } | 
 |  | 
 |   void ComputeAndCompareCovarianceBlocks(const Covariance::Options& options, | 
 |                                          const double* expected_covariance) { | 
 |     // Generate all possible combination of block pairs and check if the | 
 |     // covariance computation is correct. | 
 |     for (int i = 1; i <= 64; ++i) { | 
 |       vector<pair<const double*, const double*> > covariance_blocks; | 
 |       if (i & 1) { | 
 |         covariance_blocks.push_back(all_covariance_blocks_[0]); | 
 |       } | 
 |  | 
 |       if (i & 2) { | 
 |         covariance_blocks.push_back(all_covariance_blocks_[1]); | 
 |       } | 
 |  | 
 |       if (i & 4) { | 
 |         covariance_blocks.push_back(all_covariance_blocks_[2]); | 
 |       } | 
 |  | 
 |       if (i & 8) { | 
 |         covariance_blocks.push_back(all_covariance_blocks_[3]); | 
 |       } | 
 |  | 
 |       if (i & 16) { | 
 |         covariance_blocks.push_back(all_covariance_blocks_[4]); | 
 |       } | 
 |  | 
 |       if (i & 32) { | 
 |         covariance_blocks.push_back(all_covariance_blocks_[5]); | 
 |       } | 
 |  | 
 |       Covariance covariance(options); | 
 |       EXPECT_TRUE(covariance.Compute(covariance_blocks, &problem_)); | 
 |  | 
 |       for (int i = 0; i < covariance_blocks.size(); ++i) { | 
 |         const double* block1 = covariance_blocks[i].first; | 
 |         const double* block2 = covariance_blocks[i].second; | 
 |         // block1, block2 | 
 |         GetCovarianceBlockAndCompare(block1, block2, covariance, expected_covariance); | 
 |         // block2, block1 | 
 |         GetCovarianceBlockAndCompare(block2, block1, covariance, expected_covariance); | 
 |       } | 
 |     } | 
 |   } | 
 |  | 
 |   void GetCovarianceBlockAndCompare(const double* block1, | 
 |                                     const double* block2, | 
 |                                     const Covariance& covariance, | 
 |                                     const double* expected_covariance) { | 
 |     const int row_begin = FindOrDie(column_bounds_, block1).first; | 
 |     const int row_end = FindOrDie(column_bounds_, block1).second; | 
 |     const int col_begin = FindOrDie(column_bounds_, block2).first; | 
 |     const int col_end = FindOrDie(column_bounds_, block2).second; | 
 |  | 
 |     Matrix actual(row_end - row_begin, col_end - col_begin); | 
 |     EXPECT_TRUE(covariance.GetCovarianceBlock(block1, | 
 |                                               block2, | 
 |                                               actual.data())); | 
 |  | 
 |     ConstMatrixRef expected(expected_covariance, 6, 6); | 
 |     double diff_norm = (expected.block(row_begin, | 
 |                                        col_begin, | 
 |                                        row_end - row_begin, | 
 |                                        col_end - col_begin) - actual).norm(); | 
 |     diff_norm /= (row_end - row_begin) * (col_end - col_begin); | 
 |  | 
 |     const double kTolerance = 1e-5; | 
 |     EXPECT_NEAR(diff_norm, 0.0, kTolerance) | 
 |         << "rows: " << row_begin << " " << row_end << "  " | 
 |         << "cols: " << col_begin << " " << col_end << "  " | 
 |         << "\n\n expected: \n " << expected.block(row_begin, | 
 |                                                   col_begin, | 
 |                                                   row_end - row_begin, | 
 |                                                   col_end - col_begin) | 
 |         << "\n\n actual: \n " << actual | 
 |         << "\n\n full expected: \n" << expected; | 
 |   } | 
 |  | 
 |   double parameters_[10]; | 
 |   Problem problem_; | 
 |   vector<pair<const double*, const double*> > all_covariance_blocks_; | 
 |   map<const double*, pair<int, int> > column_bounds_; | 
 | }; | 
 |  | 
 |  | 
 | TEST_F(CovarianceTest, NormalBehavior) { | 
 |   // J | 
 |   // | 
 |   //   1  0  0  0  0  0 | 
 |   //   0  1  0  0  0  0 | 
 |   //   0  0  2  0  0  0 | 
 |   //   0  0  0  2  0  0 | 
 |   //   0  0  0  0  2  0 | 
 |   //   0  0  0  0  0  5 | 
 |   //  -5 -6  1  2  3  0 | 
 |   //   3 -2  0  0  0  2 | 
 |  | 
 |   // J'J | 
 |   // | 
 |   //   35  24 -5 -10 -15  6 | 
 |   //   24  41 -6 -12 -18 -4 | 
 |   //   -5  -6  5   2   3  0 | 
 |   //  -10 -12  2   8   6  0 | 
 |   //  -15 -18  3   6  13  0 | 
 |   //    6  -4  0   0   0 29 | 
 |  | 
 |   // inv(J'J) computed using octave. | 
 |   double expected_covariance[] = { | 
 |      7.0747e-02,  -8.4923e-03,   1.6821e-02,   3.3643e-02,   5.0464e-02,  -1.5809e-02,  // NOLINT | 
 |     -8.4923e-03,   8.1352e-02,   2.4758e-02,   4.9517e-02,   7.4275e-02,   1.2978e-02,  // NOLINT | 
 |      1.6821e-02,   2.4758e-02,   2.4904e-01,  -1.9271e-03,  -2.8906e-03,  -6.5325e-05,  // NOLINT | 
 |      3.3643e-02,   4.9517e-02,  -1.9271e-03,   2.4615e-01,  -5.7813e-03,  -1.3065e-04,  // NOLINT | 
 |      5.0464e-02,   7.4275e-02,  -2.8906e-03,  -5.7813e-03,   2.4133e-01,  -1.9598e-04,  // NOLINT | 
 |     -1.5809e-02,   1.2978e-02,  -6.5325e-05,  -1.3065e-04,  -1.9598e-04,   3.9544e-02,  // NOLINT | 
 |   }; | 
 |  | 
 |   Covariance::Options options; | 
 |  | 
 | #ifndef CERES_NO_SUITESPARSE | 
 |   options.algorithm_type = SPARSE_CHOLESKY; | 
 |   ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 |  | 
 |   options.algorithm_type = SPARSE_QR; | 
 |   ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 | #endif | 
 |  | 
 |   options.algorithm_type = DENSE_SVD; | 
 |   ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 | } | 
 |  | 
 | #ifdef CERES_USE_OPENMP | 
 |  | 
 | TEST_F(CovarianceTest, ThreadedNormalBehavior) { | 
 |   // J | 
 |   // | 
 |   //   1  0  0  0  0  0 | 
 |   //   0  1  0  0  0  0 | 
 |   //   0  0  2  0  0  0 | 
 |   //   0  0  0  2  0  0 | 
 |   //   0  0  0  0  2  0 | 
 |   //   0  0  0  0  0  5 | 
 |   //  -5 -6  1  2  3  0 | 
 |   //   3 -2  0  0  0  2 | 
 |  | 
 |   // J'J | 
 |   // | 
 |   //   35  24 -5 -10 -15  6 | 
 |   //   24  41 -6 -12 -18 -4 | 
 |   //   -5  -6  5   2   3  0 | 
 |   //  -10 -12  2   8   6  0 | 
 |   //  -15 -18  3   6  13  0 | 
 |   //    6  -4  0   0   0 29 | 
 |  | 
 |   // inv(J'J) computed using octave. | 
 |   double expected_covariance[] = { | 
 |      7.0747e-02,  -8.4923e-03,   1.6821e-02,   3.3643e-02,   5.0464e-02,  -1.5809e-02,  // NOLINT | 
 |     -8.4923e-03,   8.1352e-02,   2.4758e-02,   4.9517e-02,   7.4275e-02,   1.2978e-02,  // NOLINT | 
 |      1.6821e-02,   2.4758e-02,   2.4904e-01,  -1.9271e-03,  -2.8906e-03,  -6.5325e-05,  // NOLINT | 
 |      3.3643e-02,   4.9517e-02,  -1.9271e-03,   2.4615e-01,  -5.7813e-03,  -1.3065e-04,  // NOLINT | 
 |      5.0464e-02,   7.4275e-02,  -2.8906e-03,  -5.7813e-03,   2.4133e-01,  -1.9598e-04,  // NOLINT | 
 |     -1.5809e-02,   1.2978e-02,  -6.5325e-05,  -1.3065e-04,  -1.9598e-04,   3.9544e-02,  // NOLINT | 
 |   }; | 
 |  | 
 |   Covariance::Options options; | 
 |   options.num_threads = 4; | 
 |  | 
 | #ifndef CERES_NO_SUITESPARSE | 
 |   options.algorithm_type = SPARSE_CHOLESKY; | 
 |   ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 |  | 
 |   options.algorithm_type = SPARSE_QR; | 
 |   ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 | #endif | 
 |  | 
 |   options.algorithm_type = DENSE_SVD; | 
 |   ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 | } | 
 |  | 
 | #endif  // CERES_USE_OPENMP | 
 |  | 
 | TEST_F(CovarianceTest, ConstantParameterBlock) { | 
 |   problem_.SetParameterBlockConstant(parameters_); | 
 |  | 
 |   // J | 
 |   // | 
 |   //  0  0  0  0  0  0 | 
 |   //  0  0  0  0  0  0 | 
 |   //  0  0  2  0  0  0 | 
 |   //  0  0  0  2  0  0 | 
 |   //  0  0  0  0  2  0 | 
 |   //  0  0  0  0  0  5 | 
 |   //  0  0  1  2  3  0 | 
 |   //  0  0  0  0  0  2 | 
 |  | 
 |   // J'J | 
 |   // | 
 |   //  0  0  0  0  0  0 | 
 |   //  0  0  0  0  0  0 | 
 |   //  0  0  5  2  3  0 | 
 |   //  0  0  2  8  6  0 | 
 |   //  0  0  3  6 13  0 | 
 |   //  0  0  0  0  0 29 | 
 |  | 
 |   // pinv(J'J) computed using octave. | 
 |   double expected_covariance[] = { | 
 |               0,            0,            0,            0,            0,            0,  // NOLINT | 
 |               0,            0,            0,            0,            0,            0,  // NOLINT | 
 |               0,            0,      0.23611,     -0.02778,     -0.04167,     -0.00000,  // NOLINT | 
 |               0,            0,     -0.02778,      0.19444,     -0.08333,     -0.00000,  // NOLINT | 
 |               0,            0,     -0.04167,     -0.08333,      0.12500,     -0.00000,  // NOLINT | 
 |               0,            0,     -0.00000,     -0.00000,     -0.00000,      0.03448   // NOLINT | 
 |   }; | 
 |  | 
 |   Covariance::Options options; | 
 |  | 
 | #ifndef CERES_NO_SUITESPARSE | 
 |   options.algorithm_type = SPARSE_CHOLESKY; | 
 |   ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 |  | 
 |   options.algorithm_type = SPARSE_QR; | 
 |   ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 | #endif | 
 |  | 
 |   options.algorithm_type = DENSE_SVD; | 
 |   ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 | } | 
 |  | 
 | TEST_F(CovarianceTest, LocalParameterization) { | 
 |   double* x = parameters_; | 
 |   double* y = x + 2; | 
 |  | 
 |   problem_.SetParameterization(x, new PolynomialParameterization); | 
 |  | 
 |   vector<int> subset; | 
 |   subset.push_back(2); | 
 |   problem_.SetParameterization(y, new SubsetParameterization(3, subset)); | 
 |  | 
 |   // Raw Jacobian: J | 
 |   // | 
 |   //   1   0  0  0  0  0 | 
 |   //   0   1  0  0  0  0 | 
 |   //   0   0  2  0  0  0 | 
 |   //   0   0  0  2  0  0 | 
 |   //   0   0  0  0  0  0 | 
 |   //   0   0  0  0  0  5 | 
 |   //  -5  -6  1  2  0  0 | 
 |   //   3  -2  0  0  0  2 | 
 |  | 
 |   // Global to local jacobian: A | 
 |   // | 
 |   // | 
 |   //  1   0   0   0   0 | 
 |   //  1   0   0   0   0 | 
 |   //  0   1   0   0   0 | 
 |   //  0   0   1   0   0 | 
 |   //  0   0   0   1   0 | 
 |   //  0   0   0   0   1 | 
 |  | 
 |   // A * pinv((J*A)'*(J*A)) * A' | 
 |   // Computed using octave. | 
 |   double expected_covariance[] = { | 
 |     0.01766,   0.01766,   0.02158,   0.04316,   0.00000,  -0.00122, | 
 |     0.01766,   0.01766,   0.02158,   0.04316,   0.00000,  -0.00122, | 
 |     0.02158,   0.02158,   0.24860,  -0.00281,   0.00000,  -0.00149, | 
 |     0.04316,   0.04316,  -0.00281,   0.24439,   0.00000,  -0.00298, | 
 |     0.00000,   0.00000,   0.00000,   0.00000,   0.00000,   0.00000, | 
 |    -0.00122,  -0.00122,  -0.00149,  -0.00298,   0.00000,   0.03457 | 
 |   }; | 
 |  | 
 |   Covariance::Options options; | 
 |  | 
 | #ifndef CERES_NO_SUITESPARSE | 
 |   options.algorithm_type = SPARSE_CHOLESKY; | 
 |   ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 |  | 
 |   options.algorithm_type = SPARSE_QR; | 
 |   ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 | #endif | 
 |  | 
 |   options.algorithm_type = DENSE_SVD; | 
 |   ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 | } | 
 |  | 
 |  | 
 | TEST_F(CovarianceTest, TruncatedRank) { | 
 |   // J | 
 |   // | 
 |   //   1  0  0  0  0  0 | 
 |   //   0  1  0  0  0  0 | 
 |   //   0  0  2  0  0  0 | 
 |   //   0  0  0  2  0  0 | 
 |   //   0  0  0  0  2  0 | 
 |   //   0  0  0  0  0  5 | 
 |   //  -5 -6  1  2  3  0 | 
 |   //   3 -2  0  0  0  2 | 
 |  | 
 |   // J'J | 
 |   // | 
 |   //   35  24 -5 -10 -15  6 | 
 |   //   24  41 -6 -12 -18 -4 | 
 |   //   -5  -6  5   2   3  0 | 
 |   //  -10 -12  2   8   6  0 | 
 |   //  -15 -18  3   6  13  0 | 
 |   //    6  -4  0   0   0 29 | 
 |  | 
 |   // 3.4142 is the smallest eigen value of J'J. The following matrix | 
 |   // was obtained by dropping the eigenvector corresponding to this | 
 |   // eigenvalue. | 
 |   double expected_covariance[] = { | 
 |      5.4135e-02,  -3.5121e-02,   1.7257e-04,   3.4514e-04,   5.1771e-04,  -1.6076e-02, | 
 |     -3.5121e-02,   3.8667e-02,  -1.9288e-03,  -3.8576e-03,  -5.7864e-03,   1.2549e-02, | 
 |      1.7257e-04,  -1.9288e-03,   2.3235e-01,  -3.5297e-02,  -5.2946e-02,  -3.3329e-04, | 
 |      3.4514e-04,  -3.8576e-03,  -3.5297e-02,   1.7941e-01,  -1.0589e-01,  -6.6659e-04, | 
 |      5.1771e-04,  -5.7864e-03,  -5.2946e-02,  -1.0589e-01,   9.1162e-02,  -9.9988e-04, | 
 |     -1.6076e-02,   1.2549e-02,  -3.3329e-04,  -6.6659e-04,  -9.9988e-04,   3.9539e-02 | 
 |   }; | 
 |  | 
 |  | 
 |   { | 
 |     Covariance::Options options; | 
 |     options.algorithm_type = DENSE_SVD; | 
 |     // Force dropping of the smallest eigenvector. | 
 |     options.null_space_rank = 1; | 
 |     ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 |   } | 
 |  | 
 |   { | 
 |     Covariance::Options options; | 
 |     options.algorithm_type = DENSE_SVD; | 
 |     // Force dropping of the smallest eigenvector via the ratio but | 
 |     // automatic truncation. | 
 |     options.min_reciprocal_condition_number = 0.044494; | 
 |     options.null_space_rank = -1; | 
 |     ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 |   } | 
 | } | 
 |  | 
 | class RankDeficientCovarianceTest : public CovarianceTest { | 
 |  protected: | 
 |   virtual void SetUp() { | 
 |     double* x = parameters_; | 
 |     double* y = x + 2; | 
 |     double* z = y + 3; | 
 |  | 
 |     { | 
 |       double jacobian[] = { 1.0, 0.0, 0.0, 1.0}; | 
 |       problem_.AddResidualBlock(new UnaryCostFunction(2, 2, jacobian), NULL, x); | 
 |     } | 
 |  | 
 |     { | 
 |       double jacobian[] = { 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 }; | 
 |       problem_.AddResidualBlock(new UnaryCostFunction(3, 3, jacobian), NULL, y); | 
 |     } | 
 |  | 
 |     { | 
 |       double jacobian = 5.0; | 
 |       problem_.AddResidualBlock(new UnaryCostFunction(1, 1, &jacobian), NULL, z); | 
 |     } | 
 |  | 
 |     { | 
 |       double jacobian1[] = { 0.0, 0.0, 0.0 }; | 
 |       double jacobian2[] = { -5.0, -6.0 }; | 
 |       problem_.AddResidualBlock( | 
 |           new BinaryCostFunction(1, 3, 2, jacobian1, jacobian2), | 
 |           NULL, | 
 |           y, | 
 |           x); | 
 |     } | 
 |  | 
 |     { | 
 |       double jacobian1[] = {2.0 }; | 
 |       double jacobian2[] = { 3.0, -2.0 }; | 
 |       problem_.AddResidualBlock( | 
 |           new BinaryCostFunction(1, 1, 2, jacobian1, jacobian2), | 
 |           NULL, | 
 |           z, | 
 |           x); | 
 |     } | 
 |  | 
 |     all_covariance_blocks_.push_back(make_pair(x, x)); | 
 |     all_covariance_blocks_.push_back(make_pair(y, y)); | 
 |     all_covariance_blocks_.push_back(make_pair(z, z)); | 
 |     all_covariance_blocks_.push_back(make_pair(x, y)); | 
 |     all_covariance_blocks_.push_back(make_pair(x, z)); | 
 |     all_covariance_blocks_.push_back(make_pair(y, z)); | 
 |  | 
 |     column_bounds_[x] = make_pair(0, 2); | 
 |     column_bounds_[y] = make_pair(2, 5); | 
 |     column_bounds_[z] = make_pair(5, 6); | 
 |   } | 
 | }; | 
 |  | 
 | TEST_F(RankDeficientCovarianceTest, AutomaticTruncation) { | 
 |   // J | 
 |   // | 
 |   //   1  0  0  0  0  0 | 
 |   //   0  1  0  0  0  0 | 
 |   //   0  0  0  0  0  0 | 
 |   //   0  0  0  0  0  0 | 
 |   //   0  0  0  0  0  0 | 
 |   //   0  0  0  0  0  5 | 
 |   //  -5 -6  0  0  0  0 | 
 |   //   3 -2  0  0  0  2 | 
 |  | 
 |   // J'J | 
 |   // | 
 |   //  35 24  0  0  0  6 | 
 |   //  24 41  0  0  0 -4 | 
 |   //   0  0  0  0  0  0 | 
 |   //   0  0  0  0  0  0 | 
 |   //   0  0  0  0  0  0 | 
 |   //   6 -4  0  0  0 29 | 
 |  | 
 |   // pinv(J'J) computed using octave. | 
 |   double expected_covariance[] = { | 
 |      0.053998,  -0.033145,   0.000000,   0.000000,   0.000000,  -0.015744, | 
 |     -0.033145,   0.045067,   0.000000,   0.000000,   0.000000,   0.013074, | 
 |      0.000000,   0.000000,   0.000000,   0.000000,   0.000000,   0.000000, | 
 |      0.000000,   0.000000,   0.000000,   0.000000,   0.000000,   0.000000, | 
 |      0.000000,   0.000000,   0.000000,   0.000000,   0.000000,   0.000000, | 
 |     -0.015744,   0.013074,   0.000000,   0.000000,   0.000000,   0.039543 | 
 |   }; | 
 |  | 
 |   Covariance::Options options; | 
 |   options.algorithm_type = DENSE_SVD; | 
 |   options.null_space_rank = -1; | 
 |   ComputeAndCompareCovarianceBlocks(options, expected_covariance); | 
 | } | 
 |  | 
 | class LargeScaleCovarianceTest : public ::testing::Test { | 
 |  protected: | 
 |   virtual void SetUp() { | 
 |     num_parameter_blocks_ = 2000; | 
 |     parameter_block_size_ = 5; | 
 |     parameters_.reset(new double[parameter_block_size_ * num_parameter_blocks_]); | 
 |  | 
 |     Matrix jacobian(parameter_block_size_, parameter_block_size_); | 
 |     for (int i = 0; i < num_parameter_blocks_; ++i) { | 
 |       jacobian.setIdentity(); | 
 |       jacobian *= (i + 1); | 
 |  | 
 |       double* block_i = parameters_.get() + i * parameter_block_size_; | 
 |       problem_.AddResidualBlock(new UnaryCostFunction(parameter_block_size_, | 
 |                                                       parameter_block_size_, | 
 |                                                       jacobian.data()), | 
 |                                 NULL, | 
 |                                 block_i); | 
 |       for (int j = i; j < num_parameter_blocks_; ++j) { | 
 |         double* block_j = parameters_.get() + j * parameter_block_size_; | 
 |         all_covariance_blocks_.push_back(make_pair(block_i, block_j)); | 
 |       } | 
 |     } | 
 |   } | 
 |  | 
 |   void ComputeAndCompare(CovarianceAlgorithmType algorithm_type, | 
 |                          int num_threads) { | 
 |     Covariance::Options options; | 
 |     options.algorithm_type = algorithm_type; | 
 |     options.num_threads = num_threads; | 
 |     Covariance covariance(options); | 
 |     EXPECT_TRUE(covariance.Compute(all_covariance_blocks_, &problem_)); | 
 |  | 
 |     Matrix expected(parameter_block_size_, parameter_block_size_); | 
 |     Matrix actual(parameter_block_size_, parameter_block_size_); | 
 |     const double kTolerance = 1e-16; | 
 |  | 
 |     for (int i = 0; i < num_parameter_blocks_; ++i) { | 
 |       expected.setIdentity(); | 
 |       expected /= (i + 1.0) * (i + 1.0); | 
 |  | 
 |       double* block_i = parameters_.get() + i * parameter_block_size_; | 
 |       covariance.GetCovarianceBlock(block_i, block_i, actual.data()); | 
 |       EXPECT_NEAR((expected - actual).norm(), 0.0, kTolerance) | 
 |           << "block: " << i << ", " << i << "\n" | 
 |           << "expected: \n" << expected << "\n" | 
 |           << "actual: \n" << actual; | 
 |  | 
 |       expected.setZero(); | 
 |       for (int j = i + 1; j < num_parameter_blocks_; ++j) { | 
 |         double* block_j = parameters_.get() + j * parameter_block_size_; | 
 |         covariance.GetCovarianceBlock(block_i, block_j, actual.data()); | 
 |         EXPECT_NEAR((expected - actual).norm(), 0.0, kTolerance) | 
 |             << "block: " << i << ", " << j << "\n" | 
 |             << "expected: \n" << expected << "\n" | 
 |             << "actual: \n" << actual; | 
 |       } | 
 |     } | 
 |   } | 
 |  | 
 |   scoped_array<double> parameters_; | 
 |   int parameter_block_size_; | 
 |   int num_parameter_blocks_; | 
 |  | 
 |   Problem problem_; | 
 |   vector<pair<const double*, const double*> > all_covariance_blocks_; | 
 | }; | 
 |  | 
 | #if !defined(CERES_NO_SUITESPARSE) && defined(CERES_USE_OPENMP) | 
 |  | 
 | TEST_F(LargeScaleCovarianceTest, Parallel) { | 
 |   ComputeAndCompare(SPARSE_CHOLESKY, 4); | 
 |   ComputeAndCompare(SPARSE_QR, 4); | 
 | } | 
 |  | 
 | #endif  // !defined(CERES_NO_SUITESPARSE) && defined(CERES_USE_OPENMP) | 
 |  | 
 | }  // namespace internal | 
 | }  // namespace ceres |